Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCGGACCGTGCTGCC
..(((((.((((((...((((&))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018416
GeneSymbolFOXJ2
Binding site203,223
Score0.846
Seed0
Au0.265
Energy-21.3
Binding len20
Me-8.239
Phylopstem1.1634104333333333
Phylopflank0.8784591581250001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure