Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCCAACAGGAGCTGCAGG
((((((((.(.((((...(((&)))....)))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018420
GeneSymbolSLC22A15
Binding site962,985
Score0.846
Seed1
Au0.471
Energy-20.4
Binding len23
Me-8.052
Phylopstem1.1620670124999999
Phylopflank2.127775991249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure