Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTGCAGCTGGAAGGCTGCT
..((((((.((((((((((((&))))..))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018423
GeneSymbolSTYK1
Binding site807,831
Score1.0
Seed1
Au0.485
Energy-22.7
Binding len24
Me-6.013
Phylopstem0.2920038142857142
Phylopflank0.0625668025
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure