Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTGGCAGCTGAAGCTGCAGG
((((((((.(((((((.(.((&)).).))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018428
GeneSymbolUTP6
Binding site1293,1315
Score0.808
Seed1
Au0.485
Energy-21.7
Binding len22
Me-4.994
Phylopstem0.24462112500000002
Phylopflank0.014061374999999992
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure