Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTAGAGCATTGTGTGAGGTG
((((..((((((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018429
GeneSymbolBDP1
Binding site1944,1967
Score0.846
Seed0
Au0.603
Energy-16.3
Binding len16
Me-9.958
Phylopstem-0.21256280000000002
Phylopflank0.3986963599999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure