Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTGGAGCCAGCAGCTGTGGG
((((((((((((((.(((.(.&).))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018433
GeneSymbolKDM3A
Binding site2478,2500
Score0.846
Seed1
Au0.353
Energy-22.5
Binding len22
Me-4.673
Phylopstem0.6403955933333333
Phylopflank0.9615080649999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure