Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCAGGCGGCGGCTGCAGG
((((((((((.(((((.((((&)))).)))).).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018439
GeneSymbolIMPACT
Binding site47,70
Score0.846
Seed1
Au0.206
Energy-27.3
Binding len23
Me-6.762
Phylopstem-0.5370027599999999
Phylopflank0.49344000999999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure