Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCAAGGAGGTGGCTGCAGCTGCAC
.(((((((((((((.......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018440
GeneSymbolPAG1
Binding site1269,1294
Score0.923
Seed1
Au0.456
Energy-23.6
Binding len15
Me-4.762
Phylopstem-0.5244350076923078
Phylopflank-0.27696112625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure