Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGACATGCAGCTGCAT
.(((((((((((((.(..(((&)))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018446
GeneSymbolGLT8D1
Binding site947,967
Score0.981
Seed1
Au0.574
Energy-22.8
Binding len20
Me-4.529
Phylopstem4.749793714285715
Phylopflank3.5096000499999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure