Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGTAAGGGCGGCCGCGGCGAGCC
..((.(((((((((((.....&.)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018446
GeneSymbolGLT8D1
Binding site220,249
Score1.0
Seed0
Au0.338
Energy-22.5
Binding len17
Me-9.076
Phylopstem-0.3217339545454545
Phylopflank0.17041298124999996
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure