Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCAAGTAGCTGTGAT
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018448
GeneSymbolCAND1
Binding site8817,8843
Score0.846
Seed1
Au0.456
Energy-20.9
Binding len26
Me-4.171
Phylopstem0.029052190476190464
Phylopflank-0.06396180000000011
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure