Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGATACTGGCTGCAC
.(((((((...((((((((((&))))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018451
GeneSymbolCENPJ
Binding site1690,1711
Score0.923
Seed1
Au0.544
Energy-24.3
Binding len21
Me-8.917
Phylopstem0.96378966
Phylopflank1.03563085370125
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure