Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACTACTATGCAGCTGCC
..(((((((((((.((.((((&)))))).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018451
GeneSymbolCENPJ
Binding site3785,3806
Score0.846
Seed1
Au0.456
Energy-19.3
Binding len21
Me-5.814
Phylopstem3.9233113846153844
Phylopflank2.3511598525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure