Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCTCTCCATGTTTGCAGCCACTGCTGACCCCGCAGCCTTGGCAGCTGCC
..((((((((((((((..(((&.)))..))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365295
GeneSymbolVPS35L
Binding site256,309
Score0.923
Seed1
Au0.412
Energy-26.6
Binding len24
Me-4.957
Phylopstem3.2621986682352944
Phylopflank1.5826896357499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure