Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAAGGCCTGGGATTTTTTGTCTGAAAATCAACTGCAGACTGTAAA
(((((((((((((((..((((&.))))....................))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018455
GeneSymbolCENPN
Binding site145,193
Score0.846
Seed1
Au0.618
Energy-23.0
Binding len42
Me-4.171
Phylopstem-0.5947183562499999
Phylopflank-0.5346839775000001
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure