Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAATGTGGCTGCC
..((((((((.(((((.(((.&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018462
GeneSymbolBRK1
Binding site705,723
Score0.846
Seed1
Au0.485
Energy-20.6
Binding len18
Me-7.782
Phylopstem0.440896875
Phylopflank0.47769604125000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure