Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGCACTGCTTCTGTGAA
((((((..((((.((((((((&))))).)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018462
GeneSymbolBRK1
Binding site618,640
Score0.846
Seed0
Au0.529
Energy-19.0
Binding len22
Me-9.084
Phylopstem0.43233844444444447
Phylopflank0.062629535
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure