Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCGATAATGGCGGCGTCGAGGCTGGAGCTAAACCTGGTGCGGCTGCT
..(((((((((.(....((((&.))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018467
GeneSymbolUSE1
Binding site38,90
Score0.923
Seed1
Au0.309
Energy-19.9
Binding len17
Me-10.129
Phylopstem1.7639080333333337
Phylopflank1.867504872589286
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure