Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAACAAATGCTGTAAA
(((((((....(((((((((.&)))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018473
GeneSymbolACOT13
Binding site2590,2611
Score1.0
Seed1
Au0.632
Energy-20.6
Binding len21
Me-11.375
Phylopstem0.029880966666666644
Phylopflank-0.13888587812500003
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure