Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCGCAGCCTGTG
..(((((((((((((((....&)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018475
GeneSymbolTMEM165
Binding site390,407
Score0.923
Seed1
Au0.176
Energy-24.8
Binding len17
Me-4.957
Phylopstem0.9324793874999999
Phylopflank1.27517009625
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure