Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTACATGTTCATGATGTGCCC
....((((((((((((((((((&)))))))))).....)).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018476
GeneSymbolBEX1
Binding site597,622
Score0.846
Seed0
Au0.588
Energy-14.8
Binding len25
Me-9.547
Phylopstem0.26510982916666664
Phylopflank0.6444160900000001
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure