Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAATGGCAGTTGGCAAC
((((((((((.((((.((((.&)))))))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018486
GeneSymbolHDAC8
Binding site954,975
Score0.923
Seed1
Au0.544
Energy-22.6
Binding len21
Me-6.995
Phylopstem4.946583545454545
Phylopflank4.145057623749999
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure