Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGACAGCTCGATCTGTTCGAACAAGACGGTTGGCAGCTGCAGA
((((((((((.((((((.(((&))).)))))............................).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018489
GeneSymbolASH1L
Binding site7986,8036
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len50
Me-6.762
Phylopstem2.2593449
Phylopflank2.59636112625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure