Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAAAGTAGCTGGGTT
(((((((.(((..(((((....&)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018490
GeneSymbolLGR4
Binding site2338,2356
Score0.846
Seed1
Au0.5
Energy-16.9
Binding len18
Me-10.887
Phylopstem5.4014242857142865
Phylopflank3.9533463187499995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure