Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGCGTGCGCGGCTGCGGT
(((((((((((..(((..(((&)))..)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018491
GeneSymbolCBWD1
Binding site11,33
Score0.923
Seed1
Au0.274
Energy-22.4
Binding len22
Me-8.574
Phylopstem-0.5427680745454546
Phylopflank-0.4212427829545453
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure