Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGTATGCAGCTTCAATTGCAGCAGCTGTG
..(((((((((((((((((((&))))....))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018518
GeneSymbolMCM10
Binding site1519,1552
Score0.846
Seed1
Au0.529
Energy-22.2
Binding len33
Me-4.957
Phylopstem2.6248739843749997
Phylopflank3.6335988325
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure