Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTGGAGTGCAGTAGTGCGATCGCGGCACACTGCAGC
(((((((((((((((((....&.))))))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018518
GeneSymbolMCM10
Binding site3533,3574
Score0.846
Seed1
Au0.368
Energy-22.1
Binding len23
Me-3.938
Phylopstem-0.14566414285714285
Phylopflank-0.13940233124999998
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure