Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATAGCGCCGGGCTGTAAG
((((((((.((((..((.(((&))).))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018555
GeneSymbolZNF331
Binding site528,549
Score0.923
Seed1
Au0.368
Energy-20.6
Binding len21
Me-6.586
Phylopstem-0.22177526250000001
Phylopflank-0.16744476625000004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure