Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCATATGGAATGCCAGGG
.((((((((.(.((((.((((.&)))).)))).).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018557
GeneSymbolLRP1B
Binding site1718,1739
Score0.872
Seed1
Au0.485
Energy-19.2
Binding len21
Me-8.383
Phylopstem4.7041925
Phylopflank4.640493788749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure