Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCAAGCCATGCTATAATCGCCGCTGCAT
.((((((.(((((((((.(((&.)))....))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018557
GeneSymbolLRP1B
Binding site7950,7981
Score0.962
Seed1
Au0.529
Energy-23.2
Binding len25
Me-6.107
Phylopstem3.6965794444444446
Phylopflank4.2910134875
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure