Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATAACCCAAATGGCTGCAAA
(((((((((.((((((.((((&)))).))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018557
GeneSymbolLRP1B
Binding site9286,9311
Score0.808
Seed1
Au0.618
Energy-21.7
Binding len25
Me-5.18
Phylopstem5.3597656923076915
Phylopflank5.14939769125
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure