Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAAACTGCAGCCAGTGAA
((((.(((((((((..((((.&))))..)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018559
GeneSymbolGPALPP1
Binding site2813,2835
Score1.0
Seed0
Au0.691
Energy-21.0
Binding len22
Me-9.025
Phylopstem-0.019757533333333327
Phylopflank-0.03582367749999997
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure