Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTGCTGCAGGGACATGCT
..(((((((((((.(((((((&))))))).)))))))...).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018561
GeneSymbolUSP49
Binding site1975,1999
Score0.846
Seed1
Au0.515
Energy-21.7
Binding len24
Me-5.814
Phylopstem0.27157323333333344
Phylopflank1.1161313262499999
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure