Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGAGACCCCGCTGCAGCTGCT
..(((((((((((.(...(((&.)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365310
GeneSymbolPERCC1
Binding site313,338
Score0.923
Seed1
Au0.338
Energy-22.7
Binding len18
Me-6.047
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure