Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCTTATGCAGCTT
....(((((((...((((((.&))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018566
GeneSymbolYOD1
Binding site2472,2490
Score0.846
Seed0
Au0.676
Energy-18.5
Binding len18
Me-15.039
Phylopstem0.11231962857142859
Phylopflank0.2849832325
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure