Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAAAATGTATATGTCAATTTACAAGGCCAGGG
.((((((......((((((((.&.))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018569
GeneSymbolAP1AR
Binding site2247,2281
Score0.846
Seed1
Au0.676
Energy-16.7
Binding len18
Me-15.867
Phylopstem-0.100024325
Phylopflank0.1367630425
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure