Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCGGATGCAGCTGCC
..(((((((((.(((((.(((&))).))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018569
GeneSymbolAP1AR
Binding site222,242
Score0.923
Seed1
Au0.324
Energy-24.3
Binding len20
Me-8.304
Phylopstem2.268961444444445
Phylopflank0.552828366375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure