Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAATCTATAGATGTCTGACAGCCAGCCTAGTAGCTGCAAG
((((((((((((((((.(((.&.))).))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018569
GeneSymbolAP1AR
Binding site4378,4421
Score0.923
Seed1
Au0.574
Energy-23.9
Binding len28
Me-3.938
Phylopstem0.11907844545454545
Phylopflank-0.06425832625000007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure