Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCTGGTGCCCATGTTCTGATTGTGTGTGGGA
..((.(((((((((.((((...&.))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018590
GeneSymbolCSGALNACT2
Binding site2269,2304
Score0.923
Seed0
Au0.515
Energy-16.8
Binding len18
Me-9.811
Phylopstem-0.2697799333333333
Phylopflank0.08893294125000001
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure