Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTGTGTCCCCGGCAGCCTCAGTGCAGC
(((((.(((.((((((..((.&.)).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018602
GeneSymbolDNAJA4
Binding site2254,2285
Score0.923
Seed0
Au0.456
Energy-20.1
Binding len20
Me-7.081
Phylopstem-0.8144757833333335
Phylopflank0.4125469950000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure