Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACTTGCTGTGGTTGTGGT
(((((((((((((.(((((..&)))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018638
GeneSymbolETNK1
Binding site6149,6170
Score0.846
Seed1
Au0.588
Energy-17.3
Binding len21
Me-4.794
Phylopstem0.06449336153846154
Phylopflank0.24114118350000008
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure