Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCCGCCCGGTGCAGA
(((((.(.((((((((.((((&))))))))))))..).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018644
GeneSymbolB3GAT1
Binding site534,556
Score1.0
Seed0
Au0.309
Energy-24.6
Binding len22
Me-8.152
Phylopstem-0.48277918749999993
Phylopflank-0.0014156800000000302
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure