Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACCCAGGCAGCTGCAT
.(((((((((((.(((.....&))).))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018644
GeneSymbolB3GAT1
Binding site3431,3449
Score0.846
Seed1
Au0.515
Energy-21.0
Binding len18
Me-5.082
Phylopstem0.5180757846153845
Phylopflank0.67011122125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure