Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCATTCATTCAACAAAAATTTATTGAGCATATACTGTGTGCCAGGTA
((((((((((((.((((..(((&.)))..)))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018656
GeneSymbolSLC35E3
Binding site6027,6076
Score0.846
Seed1
Au0.647
Energy-22.9
Binding len24
Me-5.227
Phylopstem-0.009470183333333331
Phylopflank0.05102352750000006
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure