Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAAATGTAGCTGCGGA
(((((((((((....((((((&))))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018656
GeneSymbolSLC35E3
Binding site10316,10336
Score1.0
Seed1
Au0.574
Energy-22.9
Binding len20
Me-10.166
Phylopstem-0.08276369090909091
Phylopflank-0.04714901750000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure