Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTTTTAATTATTACTCGTAGCTGCAAG
(((((((((((((.((((...&.)))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018656
GeneSymbolSLC35E3
Binding site11405,11436
Score1.0
Seed1
Au0.588
Energy-21.9
Binding len21
Me-4.794
Phylopstem0.19401395714285719
Phylopflank0.08705363524999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure