Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCACAATTGTATACAGGGGGCACCTGTGGCCAGGC
.((((((.((((.(((......&.)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018664
GeneSymbolBATF3
Binding site531,566
Score0.846
Seed1
Au0.382
Energy-16.3
Binding len17
Me-7.396
Phylopstem3.380130933333333
Phylopflank3.4763563862500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure