Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGAGGAGCGTCGCGGCGCCCGGGAACCAGCCGCAGCCGCAGC
((((.((((((((((......&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018664
GeneSymbolBATF3
Binding site110,157
Score1.0
Seed0
Au0.265
Energy-24.4
Binding len17
Me-8.29
Phylopstem0.3305012
Phylopflank0.41591533499999994
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure