Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGCAGCC
.....(((((((((((((((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018667
GeneSymbolSMPD3
Binding site2422,2438
Score0.923
Seed0
Au0.294
Energy-27.0
Binding len16
Me-13.666
Phylopstem1.1713050666666665
Phylopflank2.1616998875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure