Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGTGCTGCCTGCAGCTGCT
..(((((((((((.(((.(((&)))..))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018667
GeneSymbolSMPD3
Binding site575,597
Score0.846
Seed1
Au0.309
Energy-24.5
Binding len22
Me-5.814
Phylopstem-0.7008312833333333
Phylopflank-0.026690785000000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure